Introduction:

The tool takes a peak table file as input and expands the reaction ratio variable from KEGG pathway database. The first column of peak table must be denoted by compound name.

Input files:

1.      Peak table file in Tab-delimited text format with the first column denoted by compound name.

For example:

AlignID

STDmix_GC_01

STDmix_GC_02

STDmix_GC_03

1

1486892478

561322777

3448620272

Nitrogen dioxide

5492977592

684434115

3265669981

Ethanol, 2-fluoro-

2265686433

4182838129

4365291513

3-Pentanone, 2,2,4,4-tetramethyl-

13390154

12612932

21155307

Hydrazine

14588107

8510918

7224351

Output files:

1.      'Ratio.txt', only contains reaction ratio variable.

2.      'AllMet_and_Ratio.txt', contains all metabolites and reaction ratio variable.

3.      'reactions_info.txt', detail Information about reaction ratio.