Introduction:
The tool takes a one-column compound list file as
input and performs pathway analysis and enrichment analysis, including
compounds ID mapping, KEGG pathway, and enrichment analysis.
Input files:
A one-column compound
list file in text format.
For example:
|
Oxoglutaric
acid |
|
p-Anisic acid |
|
Nitrogen
dioxide |
|
Ethanol,
2-fluoro- |
|
3-Pentanone,
2,2,4,4-tetramethyl- |
|
Hydrazine |
Parameter:
Specific parameters refer to corresponding
modules.
Output files:
'compounds_idmapping.txt ', compounds annotation
result.
'Pathway_Result.txt', KEGG pathway enrichment
analysis result.
'Pathway_Bubbleplot.pdf', KEGG pathway enrichment
result visualization diagram.
'Pathway_Barplot.pdf', KEGG pathway enrichment
result visualization diagram.
'MSEA_Result.txt', enrichment analysis result.
'Enrichment_Barplot.pdf', enrichment result
visualization diagram.
'Network.pdf, enrichment result visualization
diagram.